The Salmon Ecosystem Data Hub

Domains & Essential Salmon Variables

Every data source in the hub is tagged against two linked vocabularies: the domains a salmon passes through over its life cycle, and the Essential Salmon Variables (ESVs) those sources measure. Each ESV only applies to a specific subset of domains — this page shows both vocabularies and exactly how they connect.

The 8 life-stage domains

Domains represent the stages of a salmon's migratory life cycle, from freshwater rearing out to the ocean and back again to spawn — grouped here into 4 broader environments.

1

River Rearing

Freshwater

23 ESVs

2

River Migration Smolt

Freshwater

24 ESVs

3

Estuary Migration Post-Smolt

Estuary

22 ESVs

4

Coastal Migration Post-Smolt

Coastal

24 ESVs

5

Ocean Migration

Shelf Seas Open Ocean

32 ESVs

6

Coastal Migration Adult

Coastal

20 ESVs

7

Estuary Migration Adult

Estuary

21 ESVs

8

River Migration Adult

Freshwater

22 ESVs

What each domain covers

  1. 1River Rearing

    Juvenile salmon (fry and parr) feeding and growing in fresh water, from emergence until they become smolts, usually after one to four years. Conditions here set smolt size and condition, which carry over into survival at sea.

  2. 2River Migration Smolt

    Smolts migrating downstream to the head of tide, mostly in spring. A short journey, but delays and predation along the way can reduce how many reach the sea.

  3. 3Estuary Migration Post-Smolt

    The first days in salt water, as smolts pass through the estuary to the coast. The fish adapt to sea water while exposed to predators, and survival here can vary a great deal from year to year.

  4. 4Coastal Migration Post-Smolt

    The first weeks and months at sea, along the coast and across the continental shelf on routes particular to each region's stocks, such as the European shelf edge towards the Norwegian Sea. Nearshore waters, within about 50 km of the river mouth, are where coastal aquaculture and predators may matter most.

  5. 5Ocean Migration

    The open-ocean feeding grounds where salmon from many rivers mix, through one or more winters at sea: chiefly the Norwegian Sea, the Faroes, West Greenland and the Labrador Sea. Growth here shapes when fish mature and return.

  6. 6Coastal Migration Adult

    Returning adults crossing the shelf seas and following the coast back towards their home river. Coastal net fisheries and bycatch can take fish on this leg.

  7. 7Estuary Migration Adult

    Adults passing through the estuary, sometimes waiting there for river flows to rise. The last stage of the marine phase before re-entering fresh water.

  8. 8River Migration Adult

    Adults migrating upstream to their spawning grounds and spawning, along with the kelts that survive afterwards. Skin diseases have been increasingly reported in fish after they enter fresh water.

The 60 Essential Salmon Variables

Every ESV falls into one of three categories, and applies to the domains listed on its card below — a (domain, ESV) pair outside that list isn't applicable, not merely uncovered by data yet.

Physical

(16)

Air Temperature

Meteorological temperature records

River RearingRiver Migration SmoltEstuary Migration Post-SmoltCoastal Migration Post-SmoltOcean MigrationCoastal Migration AdultEstuary Migration AdultRiver Migration Adult

Alkalinity (freshwater)

Freshwater - alkalinity

River RearingRiver Migration Smolt

Currents (marine subsurface)

Marine - subsurface current speed and direction.

Coastal Migration Post-SmoltOcean MigrationCoastal Migration Adult

Currents (marine surface)

Marine - surface current speed and direction.

Coastal Migration Post-SmoltOcean MigrationCoastal Migration Adult

Dissolved Oxygen (freshwater)

Freshwater - dissolved oxygen (DO)

River RearingRiver Migration SmoltEstuary Migration Post-SmoltEstuary Migration AdultRiver Migration Adult

Dissolved Oxygen (marine)

Marine - dissolved oxygen (DO) below the euphotic zone.

Estuary Migration Post-SmoltCoastal Migration Post-SmoltOcean MigrationCoastal Migration AdultEstuary Migration Adult

Hydrology (freshwater)

Freshwater - hydrological regimes of surface water networks.

River RearingRiver Migration SmoltEstuary Migration Post-SmoltEstuary Migration AdultRiver Migration Adult

Morphology (freshwater)

Freshwater - physical characteristics of surface water networks.

River RearingRiver Migration SmoltEstuary Migration Post-SmoltEstuary Migration AdultRiver Migration Adult

NPS (freshwater)

Freshwater - availability of nitrate (NO3), phosphate (PO4), silicic acid (Si(OH)4), ammonium (NH4), nitrite (NO2)

River RearingRiver Migration Smolt

NPS (marine)

Marine - availability of nitrate (NO3), phosphate (PO4), silicic acid (Si(OH)4), ammonium (NH4), nitrite (NO2)

Estuary Migration Post-SmoltCoastal Migration Post-SmoltOcean Migration

Salinity (marine subsurface)

Marine - subsurface salinity

Estuary Migration Post-SmoltCoastal Migration Post-SmoltOcean MigrationCoastal Migration AdultEstuary Migration Adult

Salinity (marine surface)

Marine - surface salinity

Estuary Migration Post-SmoltCoastal Migration Post-SmoltOcean MigrationCoastal Migration AdultEstuary Migration Adult

Suspended Solids (freshwater)

Freshwater - suspended particles

River Rearing

Water Temperature (freshwater)

Freshwater - water temperature

River RearingRiver Migration SmoltRiver Migration Adult

Water Temperature (marine subsurface)

Marine - subsurface water temperatures.

Estuary Migration Post-SmoltCoastal Migration Post-SmoltOcean MigrationCoastal Migration AdultEstuary Migration Adult

Water Temperature (marine surface)

Marine - surface water temperatures.

Estuary Migration Post-SmoltCoastal Migration Post-SmoltOcean MigrationCoastal Migration AdultEstuary Migration Adult

Salmon Trait

(30)

Abundance (adult spawning stock)

Freshwater - abundance of the adult spawning stock

River Migration Adult

Abundance (egg deposition)

Freshwater - abundance of eggs

River Migration Adult

Abundance (juvenile standing stock)

Freshwater - distribution and abundance of juveniles

River Rearing

Abundance (pfa)

Marine - modelled abundance of salmon cohort on the 1st of January of year 1 marine phase.

Ocean Migration

Abundance (smolt)

Freshwater - abundance of smolts prior to ocean entry

River Migration Smolt

Age Structure (adult spawning stock)

Freshwater - age composition of the adult spawning stock

River Migration Adult

Age Structure (juvenile standing stock)

Freshwater - age composition of the juvenile standing stock

River Rearing

Age Structure (pfa)

Marine - age composition of post-smolts on the 1st of January of year 1 marine phase.

Ocean Migration

Age Structure (smolt)

Freshwater - age composition of smolt population prior to ocean entry

River Migration Smolt

Condition (adult spawning stock)

Freshwater/Marine - indices of physical condition in the adult spawning stock.

Ocean MigrationCoastal Migration AdultEstuary Migration AdultRiver Migration Adult

Condition (juvenile standing stock)

Freshwater - indices of physical condition in the juvenile standing stock.

River Rearing

Condition (smolt)

Freshwater - indices of physical condition in the smolt population.

River Migration Smolt

Fecundity (adult spawning stock)

Freshwater- the reproductive capacity of females in the adult spawning stock.

River Migration Adult

Genetic Sampling

Collection and/or analysis of genetic material

River RearingRiver Migration SmoltEstuary Migration Post-SmoltCoastal Migration Post-SmoltOcean MigrationCoastal Migration AdultEstuary Migration AdultRiver Migration Adult

Growth Rate From Scales

Freshwater/Marine - back calculated growth rates from scale analysis.

River Migration SmoltEstuary Migration Post-SmoltCoastal Migration Post-SmoltOcean MigrationCoastal Migration AdultEstuary Migration AdultRiver Migration Adult

Health State (adult spawning stock)

Freshwater/Marine - indices of health/disease status in the adult spawning stock.

Ocean MigrationCoastal Migration AdultEstuary Migration AdultRiver Migration Adult

Health State (juvenile standing stock)

Freshwater - indices of health/disease status in the juvenile standing stock.

River Rearing

Health State (smolt)

Freshwater - indices of health/disease status in the smolt population.

River Migration Smolt

Maturation Rate (juvenile standing stock)

Freshwater - Precocious maturation in juvenile standing stock.

River Rearing

Maturation Rate (pfa)

Marine - modelled maturing and non-maturing ratio within cohort on the 1st of January of year 1 marine phase.

Ocean Migration

Migration Timings (river entry adult)

Freshwater - run timing of adults.

River Migration Adult

Migration Timings (smolt emigration)

Freshwater - timing of smolt emigration.

River Migration Smolt

Nutritional State (adult spawning stock)

Freshwater/Marine - indices of nutritional state in the adult spawning stock.

Ocean MigrationCoastal Migration AdultEstuary Migration AdultRiver Migration Adult

Nutritional State (juvenile standing stock)

Freshwater - indices of nutritional state in the juvenile standing stock.

River Rearing

Nutritional State (smolt)

Freshwater - indices of nutritional state in the smolt population.

River Migration Smolt

Sex Ratio (adult spawning stock)

Freshwater - proportions of males and females in the adult spawning stock.

River Migration Adult

Sex Ratio (pfa)

Marine - modelled proportions of male and females of post-smolts on the 1st of January of year 1 marine phase.

Ocean Migration

Sex Ratio (smolt)

Freshwater - proportions of males and females in the smolt population.

River Migration Smolt

Sex ratio (juvenile standing stock)

Freshwater - proportions of males and females in the juvenile standing stock.

River Rearing

Tagging, Marking and Tracking

Tagging, marking and/or tracking, including recoveries

River RearingRiver Migration SmoltEstuary Migration Post-SmoltCoastal Migration Post-SmoltOcean MigrationCoastal Migration AdultEstuary Migration AdultRiver Migration Adult

Biological

(14)

Avian Population Dynamics and Ecology

Abundance, distribution, condition and diet of avian predators of salmon.

River RearingRiver Migration SmoltEstuary Migration Post-SmoltCoastal Migration Post-SmoltOcean MigrationEstuary Migration AdultRiver Migration Adult

Commercial Fishing Bycatch

Occurrence, distribution and/or abundance of salmon caught as bycatch.

Coastal Migration Post-SmoltOcean MigrationCoastal Migration Adult

Dissolved organic carbon (marine)

Marine - dissolved organic carbon (DOC)

Coastal Migration Post-SmoltOcean Migration

Fish Parasites, Pathogens and Disease

Occurence, distribution, diversity and abundance of salmon parasites, pathogens and diseases.

River RearingRiver Migration SmoltEstuary Migration Post-SmoltCoastal Migration Post-SmoltOcean MigrationCoastal Migration AdultEstuary Migration AdultRiver Migration Adult

Fish Population Dynamics and Ecology

Abundance, distribution, condition and diet of fish predators of salmon.

River RearingRiver Migration SmoltEstuary Migration Post-SmoltCoastal Migration Post-SmoltOcean MigrationCoastal Migration AdultEstuary Migration AdultRiver Migration Adult

Fish Population Dynamics and Ecology (Prey)

Abundance, distribution, condition and diet of fish species that may be prey for salmon.

Estuary Migration Post-SmoltCoastal Migration Post-SmoltOcean Migration

Fish Population Dynamics and Ecology (buffer)

Abundance, distribution, condition and diet of fish species that may act as a buffer from predation of salmon

River Migration SmoltEstuary Migration Post-SmoltCoastal Migration Post-SmoltOcean MigrationCoastal Migration AdultEstuary Migration Adult

Fish Population Dynamics and Ecology (competitor)

Abundance, distribution, condition and diet of fish species that may compete with salmon for prey.

River RearingRiver Migration SmoltEstuary Migration Post-SmoltCoastal Migration Post-SmoltOcean Migration

Ichthyoplankton Indices

Abundance, distribution, condition and diet of fish species larvae that may be prey for salmon (prey or secondary).

Coastal Migration Post-SmoltOcean Migration

Mammal Population Dynamics and Ecology

Abundance, distribution, condition and diet of mammalian predators of salmon.

River RearingRiver Migration SmoltEstuary Migration Post-SmoltCoastal Migration Post-SmoltOcean MigrationCoastal Migration AdultEstuary Migration AdultRiver Migration Adult

Phytoplankton Biomass and Diversity (marine)

Marine - phytoplankton biomass and diversity

Estuary Migration Post-SmoltCoastal Migration Post-SmoltOcean Migration

Prey Indices (freshwater)

Freshwater - invertebrate biomass, distribution, diversity and condition (prey or secondary)

River RearingRiver Migration Smolt

Targetted Harvest Fishery

Occurrence, distribution and/or abundance of salmon caught in targetted fisheries.

Ocean MigrationCoastal Migration AdultEstuary Migration AdultRiver Migration Adult

Zooplankton Biomass and Diversity (marine)

Marine - zooplankton biomass, diversity and condition (prey or secondary)

Estuary Migration Post-SmoltCoastal Migration Post-SmoltOcean Migration